STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGK06204.1COG1959 Predicted transcriptional regulator. (159 aa)    
Predicted Functional Partners:
AGK06205.1
COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
 
 0.966
AGK06203.1
COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components.
       0.614
AGK05485.1
SUF system FeS assembly protein; COG0822 NifU homolog involved in Fe-S cluster formation.
  
  
 0.543
AGK06202.1
COG1121 ABC-type Mn/Zn transport systems, ATPase component.
       0.525
AGK06201.1
Peptidase M16 domain-containing protein; COG0612 Predicted Zn-dependent peptidases.
       0.425
AGK06200.1
Peptidase M16 domain-containing protein; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.
       0.408
AGK06152.1
COG1145 Ferredoxin.
     
 0.406
Your Current Organism:
Meiothermus ruber
NCBI taxonomy Id: 504728
Other names: M. ruber DSM 1279, Meiothermus ruber ATCC 35948, Meiothermus ruber DSM 1279
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.