STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF64307.1Peptide/nickel transport system substrate-binding protein. (600 aa)    
Predicted Functional Partners:
SFF64287.1
Peptide/nickel transport system permease protein.
 
  0.924
SFF64274.1
Peptide/nickel transport system permease protein.
 
  0.922
SFF64258.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.811
SFF62370.1
Peptide/nickel transport system permease protein.
  
  0.808
SFF62386.1
Peptide/nickel transport system permease protein.
  
  0.806
SFH71612.1
Peptide/nickel transport system permease protein.
  
  0.797
SFG13334.1
Peptide/nickel transport system permease protein.
  
  0.780
SFG13374.1
Peptide/nickel transport system permease protein.
  
  0.777
SFH13128.1
Peptide/nickel transport system permease protein.
  
  0.766
SFF93793.1
Peptide/nickel transport system permease protein.
  
  0.763
Your Current Organism:
Actinopolymorpha cephalotaxi
NCBI taxonomy Id: 504797
Other names: A. cephalotaxi, Actinopolymorpha cephalotaxi Yuan et al. 2010, Actinopolymorpha sp. I06-2230, CCM 7466, DSM 45117, JCM 17964, KCTC 19293, strain I06-2230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.