STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF67772.1Cation diffusion facilitator family transporter. (311 aa)    
Predicted Functional Partners:
SFF70058.1
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
    0.686
SFF67813.1
Mannose-6-phosphate isomerase.
      0.581
SFG13933.1
Signal transduction histidine kinase.
     
 0.513
SFF67790.1
3-carboxy-cis,cis-muconate cycloisomerase.
  
    0.486
Your Current Organism:
Actinopolymorpha cephalotaxi
NCBI taxonomy Id: 504797
Other names: A. cephalotaxi, Actinopolymorpha cephalotaxi Yuan et al. 2010, Actinopolymorpha sp. I06-2230, CCM 7466, DSM 45117, JCM 17964, KCTC 19293, strain I06-2230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.