STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG29719.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
SFH37660.1
Radical SAM-linked protein.
  
     0.635
SFH33139.1
Hypothetical protein.
  
     0.631
SFH30636.1
Hypothetical protein.
  
     0.539
SFH17368.1
Molybdopterin converting factor, small subunit.
  
     0.533
SFG91618.1
Single-strand DNA-binding protein.
  
     0.494
SFG98366.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
  
     0.478
SFH37640.1
Radical SAM family uncharacterized protein.
  
     0.465
SFG47421.1
Hypothetical protein.
  
     0.445
SFG16519.1
Protein of unknown function.
  
     0.442
SFG02646.1
Hypothetical protein.
  
     0.440
Your Current Organism:
Actinopolymorpha cephalotaxi
NCBI taxonomy Id: 504797
Other names: A. cephalotaxi, Actinopolymorpha cephalotaxi Yuan et al. 2010, Actinopolymorpha sp. I06-2230, CCM 7466, DSM 45117, JCM 17964, KCTC 19293, strain I06-2230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.