STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH03945.1Hypothetical protein. (161 aa)    
Predicted Functional Partners:
SFH03969.1
Streptomycin 6-kinase.
       0.568
SFH58975.1
GxGYxY sequence motif-containing protein.
  
     0.476
SFH46012.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
     0.407
SFH15520.1
Putative phosphoribosyl transferase.
  
    0.406
SFF76352.1
Protein of unknown function.
  
     0.405
Your Current Organism:
Actinopolymorpha cephalotaxi
NCBI taxonomy Id: 504797
Other names: A. cephalotaxi, Actinopolymorpha cephalotaxi Yuan et al. 2010, Actinopolymorpha sp. I06-2230, CCM 7466, DSM 45117, JCM 17964, KCTC 19293, strain I06-2230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.