STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH64975.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SFH64912.1
Conserved hypothetical phage tail region protein.
       0.773
SFH64932.1
Hypothetical protein.
       0.773
SFH64954.1
Conserved hypothetical phage tail region protein.
       0.773
SFH64995.1
LysM domain-containing protein.
       0.773
SFH65015.1
Phage protein D.
       0.773
SFH65039.1
Hypothetical protein.
       0.773
SFH64893.1
Hypothetical protein.
       0.651
SFH65061.1
Hypothetical protein.
       0.613
SFH65087.1
Hypothetical protein.
       0.613
SFH65119.1
Putative baseplate assembly protein.
       0.613
Your Current Organism:
Actinopolymorpha cephalotaxi
NCBI taxonomy Id: 504797
Other names: A. cephalotaxi, Actinopolymorpha cephalotaxi Yuan et al. 2010, Actinopolymorpha sp. I06-2230, CCM 7466, DSM 45117, JCM 17964, KCTC 19293, strain I06-2230
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.