STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH47073.1Acetyltransferase (GNAT) family protein. (182 aa)    
Predicted Functional Partners:
SDH47095.1
Hypothetical protein.
       0.773
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
 
 0.677
SDH47113.1
Enoyl-CoA hydratase/carnithine racemase.
       0.636
SDH47135.1
Polar amino acid transport system ATP-binding protein.
  
    0.604
SDH47206.1
Polar amino acid transport system substrate-binding protein.
  
  
 0.602
SDH47155.1
Polar amino acid transport system permease protein.
       0.600
SDH47183.1
Polar amino acid transport system permease protein.
       0.600
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
  
 
 0.571
SDH59131.1
Beta-lactamase class A.
  
     0.556
argH
Argininosuccinate lyase.
  
 
 0.536
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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