STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH54693.1DNA-binding transcriptional regulator, AcrR family. (208 aa)    
Predicted Functional Partners:
SDH54441.1
3-ketosteroid 9alpha-monooxygenase subunit A.
  
  
 0.873
SDH54670.1
Acyl-CoA dehydrogenase.
 
     0.834
SDH54558.1
MaoC like domain-containing protein.
 
     0.800
SDH54583.1
Hypothetical protein.
 
     0.777
SDH54153.1
3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenase.
  
   
 0.772
SDH53633.1
Hypothetical protein.
  
     0.771
SDH53650.1
Acetyl-CoA acetyltransferase.
  
   
 0.757
SDH53506.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
     0.716
SDJ29558.1
Probable F420-dependent oxidoreductase, Rv2161c family.
  
     0.715
SDH53680.1
acetyl-CoA C-acetyltransferase.
  
   
 0.700
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.