STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH45250.1Methyltransferase domain-containing protein. (253 aa)    
Predicted Functional Partners:
SDH45259.1
1,4-alpha-glucan branching enzyme; Belongs to the glycosyl hydrolase 57 family.
 
  
 0.962
SDH45287.1
Glycogen(starch) synthase.
 
   
 0.891
SDH45304.1
Acetyltransferase (isoleucine patch superfamily).
 
   
 0.860
SDH90115.1
Lysophospholipase L1.
  
   
 0.845
SDH45415.1
Methyltransferase domain-containing protein.
  
 
   0.766
SDJ34160.1
Polynucleotide kinase-phosphatase.
   
   0.758
SDH94875.1
Hypothetical protein.
  
     0.755
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.656
SDJ31992.1
Glucosyl-3-phosphoglycerate synthase.
 
   
 0.651
SDH45149.1
S-adenosyl methyltransferase.
       0.648
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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