STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH61716.1Protein kinase domain-containing protein. (414 aa)    
Predicted Functional Partners:
SDH87623.1
FHA domain-containing protein.
  
 
 
 0.926
SDJ41706.1
Protein phosphatase.
 0.859
SDJ47471.1
Protein phosphatase.
 
  0.835
SDH61731.1
Hypothetical protein.
 
    
0.759
SDJ41728.1
Inner membrane component of T3SS domain-containing protein.
 
 
 
 0.587
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.581
SDH95256.1
Serine/threonine protein kinase.
 
 
0.564
SDJ41605.1
Serine/threonine protein kinase.
 
 
0.557
SDJ41754.1
FHA domain-containing protein.
 
 
 
 0.557
SDJ16160.1
Serine/threonine protein phosphatase PrpC.
 
  0.454
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.