STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH76734.1DNA-binding transcriptional regulator, HxlR family. (303 aa)    
Predicted Functional Partners:
SDH76716.1
Carotenoid cleavage dioxygenase.
 
     0.945
SDI11740.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.765
SDH76696.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
     0.638
SDH76753.1
Hypothetical protein.
       0.596
SDI08103.1
Transcriptional repressor.
  
     0.537
SDI08976.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
  
    0.527
SDI13820.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.517
SDH49603.1
DNA-binding transcriptional regulator, HxlR family.
  
     0.466
SDH76773.1
Hypothetical protein.
       0.421
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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