STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH86246.1L-arabinose transport system ATP-binding protein. (495 aa)    
Predicted Functional Partners:
SDH86303.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.998
SDH86233.1
L-arabinose transport system substrate-binding protein.
 
 0.997
SDH86501.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.988
SDH86516.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.972
SDI21882.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.969
SDI21917.1
Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein.
 
 0.967
SDH77365.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.933
SDH86533.1
Ribose transport system substrate-binding protein.
 
 0.926
SDH86476.1
Ribose transport system ATP-binding protein.
  
  
 
0.905
SDH60089.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.803
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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