STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH86533.1Ribose transport system substrate-binding protein. (393 aa)    
Predicted Functional Partners:
SDH86501.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
SDH86516.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.993
SDH86476.1
Ribose transport system ATP-binding protein.
 
 0.988
SDH86547.1
D-psicose/D-tagatose/L-ribulose 3-epimerase.
 
    0.950
SDI21882.1
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.942
SDH77342.1
D-xylose transport system ATP-binding protein.
 
 0.936
SDH86303.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.936
SDI05319.1
Response regulator receiver domain-containing protein.
   
 0.930
SDH86246.1
L-arabinose transport system ATP-binding protein.
 
 0.926
SDI21917.1
Simple sugar transport system substrate-binding protein/ribose transport system substrate-binding protein.
  
  
  0.898
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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