STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDH96648.1Probable F420-dependent oxidoreductase, Rv2161c family. (298 aa)    
Predicted Functional Partners:
SDI17214.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.791
SDI32264.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.791
SDI16879.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.728
SDI53157.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
  0.589
SDI16889.1
Acyl carrier protein.
  
 0.570
SDH96618.1
Prolyl oligopeptidase.
       0.569
SDI53108.1
NitT/TauT family transport system substrate-binding protein.
 
 
  0.568
SDH96558.1
Hypothetical protein.
 
     0.557
SDI78906.1
FMN reductase.
  
  0.543
SDH67628.1
NitT/TauT family transport system substrate-binding protein.
  
 
  0.532
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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