STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI11169.1Glycosyl hydrolases family 18. (449 aa)    
Predicted Functional Partners:
SDI11231.1
Multiple sugar transport system permease protein.
 
     0.731
SDI11205.1
Multiple sugar transport system permease protein.
 
     0.714
SDI11263.1
Multiple sugar transport system substrate-binding protein.
 
     0.701
SDJ46495.1
Choice-of-anchor B domain-containing protein.
  
     0.685
SDJ46524.1
Choice-of-anchor B domain-containing protein.
  
     0.677
SDH92805.1
Hypothetical protein.
  
     0.649
SDI23607.1
Protein of unknown function.
  
  
 0.643
SDI60757.1
Platelet-activating factor acetylhydrolase, isoform II.
  
    0.643
SDH82506.1
Exonuclease III.
  
     0.638
SDI89725.1
Phospholipase A2.
  
     0.630
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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