STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI06886.1PS-10 peptidase S37. (478 aa)    
Predicted Functional Partners:
SDI31881.1
Glycosidase.
    
  0.665
SDI35789.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
    
  0.665
SDJ50906.1
Snapalysin.
  
     0.513
SDJ13788.1
DNA-binding transcriptional regulator, AcrR family.
  
     0.510
SDI06904.1
Hypothetical protein.
       0.493
SDI77005.1
Cobaltochelatase CobN.
     
 0.481
SDI06932.1
Lysine 2,3-aminomutase.
 
     0.468
SDH92344.1
Uncharacterized protein.
  
     0.438
SDI46968.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.437
SDI31282.1
Sporadically distributed protein, TIGR04141 family.
  
     0.417
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.