STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI35134.1Sugar lactone lactonase YvrE. (277 aa)    
Predicted Functional Partners:
SDI34924.1
NAD dependent epimerase/dehydratase family protein.
     0.941
SDI10614.1
IclR family transcriptional regulator, acetate operon repressor.
      0.870
SDI35113.1
Galactonate dehydratase.
 
  
  0.859
SDI35205.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
     
 0.778
SDI35153.1
2-dehydro-3-deoxygluconokinase.
     
 0.776
SDI35177.1
Hypothetical protein.
       0.773
SDI35215.1
Hypothetical protein.
       0.773
SDI34985.1
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
    
  0.764
SDI35064.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; Multiple sugar transport system permease protein/N-acetylglucosamine transport system permease protein.
       0.757
SDI35083.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
    0.757
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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