STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI36984.1Hexosaminidase. (788 aa)    
Predicted Functional Partners:
SDH47053.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.791
SDI04992.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.769
SDI36966.1
Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family.
 
 0.768
SDI35303.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 0.723
SDI86780.1
endo-alpha-N-acetylgalactosaminidase.
  
   
 0.710
SDI05005.1
beta-N-acetylhexosaminidase.
    
 0.668
SDH43776.1
Collagen, type V/XI/XXIV/XXVII, alpha.
  
     0.645
SDI36822.1
Alpha-glucosidase, glycosyl hydrolase family GH31.
 
 0.638
SDI86798.1
Beta-galactosidase.
 
 0.624
SDJ28436.1
beta-N-acetylhexosaminidase.
    
 0.569
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.