STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI39539.1Fe-S cluster assembly ATP-binding protein. (257 aa)    
Predicted Functional Partners:
SDI39476.1
Fe-S cluster assembly protein SufB.
 
 0.999
SDI39495.1
Fe-S cluster assembly protein SufD.
 
 0.999
SDI39578.1
Nitrogen fixation protein NifU.
 
  
 0.997
SDI39554.1
Cysteine desulfurase / selenocysteine lyase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.991
SDI39609.1
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.957
SDI23449.1
Cysteine desulfurase / selenocysteine lyase.
  
 0.914
SDI72695.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.909
SDH78541.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.900
SDI46463.1
Selenocysteine lyase/Cysteine desulfurase.
 
  
 0.860
SDJ21670.1
Cysteine desulfurase.
 
  
 0.832
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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