STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI30718.1HAMP domain-containing protein. (706 aa)    
Predicted Functional Partners:
SDI30690.1
Hypothetical protein.
     0.949
SDI30672.1
Protein of unknown function.
 
     0.947
SDI30646.1
Hypothetical protein.
 
     0.867
kdpC
K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.
  
  
 0.791
SDI22828.1
PAS fold-containing protein.
 
 0.782
SDI53042.1
Hypothetical protein.
     0.778
SDI96241.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
     0.778
SDI05192.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
     0.776
SDI36866.1
Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family.
     0.776
SDH81394.1
Hypothetical protein.
     0.775
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.