STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI46988.1Hypothetical protein. (708 aa)    
Predicted Functional Partners:
SDI07576.1
Hypothetical protein.
  
     0.732
SDH84726.1
Hypothetical protein.
  
     0.716
SDI62646.1
Hypothetical protein.
  
     0.704
SDI88730.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
     0.704
SDI09251.1
Hypothetical protein.
  
     0.668
SDI04992.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.645
SDI09585.1
Helix-turn-helix domain-containing protein.
  
     0.638
SDH51842.1
Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase.
  
     0.635
SDI79573.1
Mce-associated membrane protein.
  
     0.615
SDI08733.1
2-methylisoborneol synthase.
  
     0.604
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.