STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI48242.1FAD/FMN-containing dehydrogenase. (456 aa)    
Predicted Functional Partners:
SDH66423.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.613
SDH79881.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.590
SDH82407.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.590
SDH45013.1
Electron transfer flavoprotein alpha subunit.
  
 
 0.550
SDH45048.1
Electron transfer flavoprotein beta subunit.
  
 
 0.550
SDI48258.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.550
SDJ21137.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.532
SDH86574.1
4-hydroxybenzoate polyprenyltransferase.
    
 0.494
SDI72208.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
 
 0.492
SDJ04515.1
Helix-turn-helix of DDE superfamily endonuclease.
  
 0.492
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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