STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI44614.1Uncharacterized conserved protein YndB, AHSA1/START domain. (156 aa)    
Predicted Functional Partners:
SDI44638.1
Pimeloyl-ACP methyl ester carboxylesterase.
      0.886
SDI44594.1
FAD/FMN-containing dehydrogenase.
       0.543
SDI44575.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
       0.511
SDI44553.1
Cyclopropane-fatty-acyl-phospholipid synthase.
       0.510
SDI44651.1
Glutamate or tyrosine decarboxylase.
       0.471
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.