STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI51843.1ABC-type multidrug transport system, ATPase and permease component. (625 aa)    
Predicted Functional Partners:
SDI51828.1
ATP-binding cassette, subfamily B.
 
    
0.820
SDI17234.1
Ketoacyl-synthetase C-terminal extension; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.744
SDJ43840.1
ATP-binding cassette, subfamily C, CydCD.
  
 
 
0.686
SDI20421.1
ATPase family associated with various cellular activities (AAA); Belongs to the AAA ATPase family.
 
 0.685
SDJ39184.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
 
 
 0.671
SDJ54304.1
Right handed beta helix region.
   
 0.647
SDI17214.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.646
SDI32264.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.646
SDI16879.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.625
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.616
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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