Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDH46863.1 | SDH48615.1 | SAMN05421871_101122 | SAMN05421871_101195 | Hypothetical protein. | Putative hydrolase of the HAD superfamily. | 0.477 |
SDH46863.1 | SDH48870.1 | SAMN05421871_101122 | SAMN05421871_101205 | Hypothetical protein. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.477 |
SDH46863.1 | SDI45661.1 | SAMN05421871_101122 | SAMN05421871_10572 | Hypothetical protein. | Regulatory P domain of the subtilisin-like proprotein convertase. | 0.576 |
SDH48615.1 | SDH46863.1 | SAMN05421871_101195 | SAMN05421871_101122 | Putative hydrolase of the HAD superfamily. | Hypothetical protein. | 0.477 |
SDH48615.1 | SDH48870.1 | SAMN05421871_101195 | SAMN05421871_101205 | Putative hydrolase of the HAD superfamily. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.877 |
SDH48615.1 | SDI22828.1 | SAMN05421871_101195 | SAMN05421871_103823 | Putative hydrolase of the HAD superfamily. | PAS fold-containing protein. | 0.726 |
SDH48615.1 | SDI45661.1 | SAMN05421871_101195 | SAMN05421871_10572 | Putative hydrolase of the HAD superfamily. | Regulatory P domain of the subtilisin-like proprotein convertase. | 0.600 |
SDH48615.1 | SDJ14397.1 | SAMN05421871_101195 | SAMN05421871_110194 | Putative hydrolase of the HAD superfamily. | Adenylate cyclase. | 0.489 |
SDH48615.1 | guaA | SAMN05421871_101195 | SAMN05421871_101726 | Putative hydrolase of the HAD superfamily. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.721 |
SDH48870.1 | SDH46863.1 | SAMN05421871_101205 | SAMN05421871_101122 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Hypothetical protein. | 0.477 |
SDH48870.1 | SDH48615.1 | SAMN05421871_101205 | SAMN05421871_101195 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Putative hydrolase of the HAD superfamily. | 0.877 |
SDH48870.1 | SDI22828.1 | SAMN05421871_101205 | SAMN05421871_103823 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | PAS fold-containing protein. | 0.726 |
SDH48870.1 | SDI45661.1 | SAMN05421871_101205 | SAMN05421871_10572 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Regulatory P domain of the subtilisin-like proprotein convertase. | 0.600 |
SDH48870.1 | SDJ14397.1 | SAMN05421871_101205 | SAMN05421871_110194 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Adenylate cyclase. | 0.489 |
SDH48870.1 | guaA | SAMN05421871_101205 | SAMN05421871_101726 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.721 |
SDH59131.1 | SDI20399.1 | SAMN05421871_101600 | SAMN05421871_103712 | Beta-lactamase class A. | Carbohydrate binding module (family 6). | 0.467 |
SDH59131.1 | SDI45661.1 | SAMN05421871_101600 | SAMN05421871_10572 | Beta-lactamase class A. | Regulatory P domain of the subtilisin-like proprotein convertase. | 0.608 |
SDI20399.1 | SDH59131.1 | SAMN05421871_103712 | SAMN05421871_101600 | Carbohydrate binding module (family 6). | Beta-lactamase class A. | 0.467 |
SDI20399.1 | SDI45661.1 | SAMN05421871_103712 | SAMN05421871_10572 | Carbohydrate binding module (family 6). | Regulatory P domain of the subtilisin-like proprotein convertase. | 0.632 |
SDI22828.1 | SDH48615.1 | SAMN05421871_103823 | SAMN05421871_101195 | PAS fold-containing protein. | Putative hydrolase of the HAD superfamily. | 0.726 |
page 1 of 3