STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI66278.1Carbon-monoxide dehydrogenase large subunit. (810 aa)    
Predicted Functional Partners:
SDI66254.1
Carbon-monoxide dehydrogenase small subunit.
 0.998
SDI10118.1
Carbon-monoxide dehydrogenase small subunit.
 0.994
SDI66293.1
Carbon-monoxide dehydrogenase medium subunit.
 0.994
SDJ15537.1
Carbon-monoxide dehydrogenase small subunit.
 0.994
SDI34505.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.974
SDI10131.1
CO or xanthine dehydrogenase, FAD-binding subunit.
 0.973
SDJ15550.1
CO or xanthine dehydrogenase, FAD-binding subunit.
 0.967
SDI66318.1
Carbon monoxide dehydrogenase subunit G.
 
 
 0.960
SDH82593.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.942
SDI66238.1
Xanthine dehydrogenase accessory factor.
 
 
 0.888
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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