STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI77203.1Acyl-CoA dehydrogenase. (389 aa)    
Predicted Functional Partners:
SDI77184.1
Acyl-CoA dehydrogenase.
     0.994
SDH54096.1
Acyl-CoA dehydrogenase.
     0.975
SDI77393.1
Acyl dehydratase.
 
 0.886
SDI77410.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
   0.785
SDI77165.1
DNA-binding transcriptional regulator, AcrR family.
       0.773
SDI91002.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.742
SDJ15962.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.742
SDI79248.1
Acyl transferase domain-containing protein.
  
 0.734
SDH45048.1
Electron transfer flavoprotein beta subunit.
 
   0.701
SDH47229.1
(2R)-ethylmalonyl-CoA mutase.
    
 0.694
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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