STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI79700.1ABC-2 type transport system ATP-binding protein. (314 aa)    
Predicted Functional Partners:
SDI79683.1
ABC-2 type transport system permease protein.
 
 0.965
SDI49971.1
ABC-2 type transport system ATP-binding protein.
    
0.907
SDJ37074.1
Oleandomycin transport system permease protein.
 
 0.856
SDI38186.1
ABC-type polysaccharide/polyol phosphate export permease.
 
 0.854
SDJ44025.1
ABC-type polysaccharide/polyol phosphate export permease.
 
 0.854
SDI19321.1
ABC-2 type transport system permease protein.
  
 0.829
SDI31808.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.786
SDI86835.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.614
SDH89725.1
Lipooligosaccharide transport system permease protein.
  
 
  0.530
SDJ04654.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.527
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.