STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI79831.1Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (115 aa)    
Predicted Functional Partners:
SDI22828.1
PAS fold-containing protein.
  
 0.850
SDI79816.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
 0.810
SDI33216.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
   0.741
SDI22807.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
   0.738
SDH65143.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.735
SDI79386.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
   
  0.735
SDI05586.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
 
   0.727
SDI05271.1
Response regulator receiver domain-containing protein.
 
 0.686
SDI22905.1
Serine/threonine-protein kinase RsbW.
 
 
 0.678
SDI13796.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
   0.674
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.