STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI71410.1Histidine kinase. (534 aa)    
Predicted Functional Partners:
SDI71341.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.921
SDI12239.1
Two-component system, NarL family, response regulator DesR.
  
  0.748
SDJ14923.1
Signal transduction histidine kinase.
  
   0.705
SDJ31340.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.702
SDH61862.1
Phage shock protein PspC (stress-responsive transcriptional regulator).
  
  
 0.699
SDI99102.1
Signal transduction histidine kinase.
  
  
  0.694
SDI35494.1
Signal transduction histidine kinase.
  
     0.680
SDI47186.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.677
SDI58955.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.677
SDI49921.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.673
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.