STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI90827.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)    
Predicted Functional Partners:
SDI90846.1
Hypothetical protein.
 0.986
SDI17503.1
Two-component system, OmpR family, sensor histidine kinase VanS.
 0.921
SDI67078.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
  0.889
SDI22828.1
PAS fold-containing protein.
  
 0.851
SDJ32825.1
Signal transduction histidine kinase.
   0.850
SDI49515.1
Two-component system, OmpR family, sensor histidine kinase MprB.
 0.849
SDI13837.1
Signal transduction histidine kinase.
 0.839
SDI47283.1
Two-component system, OmpR family, sensor histidine kinase BaeS.
   0.819
SDH56890.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
 0.813
SDI49412.1
His Kinase A (phospho-acceptor) domain-containing protein.
 0.789
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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