Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDI76701.1 | SDI95990.1 | SAMN05421871_107257 | SAMN05421871_10911 | Magnesium chelatase subunit D. | Methyltransferase domain-containing protein. | 0.548 |
SDI95947.1 | SDI95960.1 | SAMN05421871_1099 | SAMN05421871_10910 | DNA-binding transcriptional regulator, MerR family. | CubicO group peptidase, beta-lactamase class C family. | 0.827 |
SDI95947.1 | SDI95990.1 | SAMN05421871_1099 | SAMN05421871_10911 | DNA-binding transcriptional regulator, MerR family. | Methyltransferase domain-containing protein. | 0.488 |
SDI95947.1 | SDI96067.1 | SAMN05421871_1099 | SAMN05421871_10912 | DNA-binding transcriptional regulator, MerR family. | AAA ATPase domain-containing protein. | 0.406 |
SDI95960.1 | SDI95947.1 | SAMN05421871_10910 | SAMN05421871_1099 | CubicO group peptidase, beta-lactamase class C family. | DNA-binding transcriptional regulator, MerR family. | 0.827 |
SDI95960.1 | SDI95990.1 | SAMN05421871_10910 | SAMN05421871_10911 | CubicO group peptidase, beta-lactamase class C family. | Methyltransferase domain-containing protein. | 0.558 |
SDI95960.1 | SDI96067.1 | SAMN05421871_10910 | SAMN05421871_10912 | CubicO group peptidase, beta-lactamase class C family. | AAA ATPase domain-containing protein. | 0.460 |
SDI95990.1 | SDI76701.1 | SAMN05421871_10911 | SAMN05421871_107257 | Methyltransferase domain-containing protein. | Magnesium chelatase subunit D. | 0.548 |
SDI95990.1 | SDI95947.1 | SAMN05421871_10911 | SAMN05421871_1099 | Methyltransferase domain-containing protein. | DNA-binding transcriptional regulator, MerR family. | 0.488 |
SDI95990.1 | SDI95960.1 | SAMN05421871_10911 | SAMN05421871_10910 | Methyltransferase domain-containing protein. | CubicO group peptidase, beta-lactamase class C family. | 0.558 |
SDI95990.1 | SDI96067.1 | SAMN05421871_10911 | SAMN05421871_10912 | Methyltransferase domain-containing protein. | AAA ATPase domain-containing protein. | 0.689 |
SDI95990.1 | SDI96138.1 | SAMN05421871_10911 | SAMN05421871_10913 | Methyltransferase domain-containing protein. | Gluconolactonase. | 0.481 |
SDI95990.1 | SDJ34160.1 | SAMN05421871_10911 | SAMN05421871_113129 | Methyltransferase domain-containing protein. | Polynucleotide kinase-phosphatase. | 0.758 |
SDI95990.1 | gcvP | SAMN05421871_10911 | SAMN05421871_102522 | Methyltransferase domain-containing protein. | Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.656 |
SDI96067.1 | SDI95947.1 | SAMN05421871_10912 | SAMN05421871_1099 | AAA ATPase domain-containing protein. | DNA-binding transcriptional regulator, MerR family. | 0.406 |
SDI96067.1 | SDI95960.1 | SAMN05421871_10912 | SAMN05421871_10910 | AAA ATPase domain-containing protein. | CubicO group peptidase, beta-lactamase class C family. | 0.460 |
SDI96067.1 | SDI95990.1 | SAMN05421871_10912 | SAMN05421871_10911 | AAA ATPase domain-containing protein. | Methyltransferase domain-containing protein. | 0.689 |
SDI96067.1 | SDI96138.1 | SAMN05421871_10912 | SAMN05421871_10913 | AAA ATPase domain-containing protein. | Gluconolactonase. | 0.470 |
SDI96138.1 | SDI95990.1 | SAMN05421871_10913 | SAMN05421871_10911 | Gluconolactonase. | Methyltransferase domain-containing protein. | 0.481 |
SDI96138.1 | SDI96067.1 | SAMN05421871_10913 | SAMN05421871_10912 | Gluconolactonase. | AAA ATPase domain-containing protein. | 0.470 |
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