STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ23764.1Putative flavoprotein involved in K+ transport. (367 aa)    
Predicted Functional Partners:
SDJ23795.1
Regulatory protein, luxR family.
 
     0.919
SDJ23745.1
Hypothetical protein.
       0.679
SDH93508.1
Regulatory protein, luxR family.
  
     0.611
SDI73098.1
Regulatory protein, luxR family.
  
     0.568
SDH84409.1
Regulatory protein, luxR family.
  
     0.547
atpA
F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.539
SDJ23722.1
Pimeloyl-ACP methyl ester carboxylesterase.
   
   0.522
SDH52014.1
Ca2+-binding protein, EF-hand superfamily.
    
   0.517
SDI09501.1
Ca2+-binding protein, EF-hand superfamily.
    
   0.517
SDI11608.1
Dimethylaniline monooxygenase (N-oxide forming).
  
     0.510
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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