STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ21294.1Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose). (138 aa)    
Predicted Functional Partners:
SDJ21271.1
decaprenylphospho-beta-D-ribofuranose 2-oxidase.
 
     0.880
SDJ21248.1
decaprenylphospho-beta-D-erythro-pentofuranosid- 2-ulose 2-reductase.
 
     0.878
SDH51563.1
Short-chain dehydrogenase.
 
     0.705
SDH58286.1
Alpha-1,2-mannosyltransferase.
  
     0.693
SDJ21137.1
Decaprenyl-phosphate phosphoribosyltransferase; Belongs to the UbiA prenyltransferase family.
 
     0.693
SDJ21121.1
PAP2 superfamily protein.
 
   
 0.658
SDH56863.1
Sporulation and spore germination.
  
     0.609
SDJ44246.1
Septum formation.
  
     0.609
SDJ34426.1
Hypothetical protein.
  
     0.601
SDH96124.1
Hypothetical protein.
  
     0.573
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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