STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ28752.1Protein of unknown function. (73 aa)    
Predicted Functional Partners:
SDI49017.1
Hypothetical protein.
  
    0.781
SDH59900.1
Hypothetical protein.
  
     0.775
SDH62990.1
Dienelactone hydrolase.
  
     0.774
SDH89336.1
Protein of unknown function.
  
     0.774
SDH67218.1
Hypothetical protein.
  
     0.772
SDJ47725.1
Hypothetical protein.
  
     0.772
SDJ33451.1
Hypothetical protein.
  
     0.771
SDJ47373.1
TIGR02569 family protein.
  
     0.771
SDI06484.1
Protein of unknown function.
  
     0.770
SDH88092.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.