STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDJ41986.1Phosphotransferase enzyme family protein. (297 aa)    
Predicted Functional Partners:
SDJ41961.1
Transcriptional regulator, contains XRE-family HTH domain.
     0.922
SDJ42541.1
SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX.
  
     0.757
SDH44221.1
Hypothetical protein.
  
     0.719
SDH45101.1
Protein of unknown function.
  
     0.658
SDH94903.1
Calcineurin-like phosphoesterase.
  
     0.612
SDI19768.1
Hypothetical protein.
 
     0.566
SDJ51646.1
Predicted arabinose efflux permease, MFS family.
  
     0.544
SDI53021.1
Protein of unknown function.
  
   0.536
SDI63727.1
Hypothetical protein.
  
     0.520
SDJ43949.1
O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain.
  
     0.519
Your Current Organism:
Alloactinosynnema album
NCBI taxonomy Id: 504798
Other names: A. album, Alloactinosynnema album Yuan et al. 2010, Amycolatopsis sp. 03-9939, CCM 7461, DSM 45114, JCM 17965, KCTC 19294, strain 03-9939
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.