STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK35116.1Putative sensory transduction regulator. (180 aa)    
Predicted Functional Partners:
mshA
D-inositol-3-phosphate glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
 
     0.837
SFK35090.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.786
SFK89291.1
Hypothetical protein.
  
     0.768
SFK90004.1
Arsenite efflux ATP-binding protein ArsA.
  
     0.757
SFK40027.1
Hypothetical protein.
  
     0.694
SFK90029.1
Arsenite efflux ATP-binding protein ArsA (TC 3.A.4.1.1).
  
     0.691
SFK59851.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.685
SFK35850.1
Protein of unknown function.
  
     0.654
SFK35168.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
       0.607
SFK35373.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.600
Your Current Organism:
Geodermatophilus ruber
NCBI taxonomy Id: 504800
Other names: CCM 7619, DSM 45317, G. ruber, Geodermatophilus ruber Zhang et al. 2011 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CPCC 201356, JCM 17967, strain CPCC 201356
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