STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK61150.1Methyltransferase domain-containing protein. (257 aa)    
Predicted Functional Partners:
SFK61176.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
       0.845
SFL36851.1
Dimethylglycine oxidase; Belongs to the GcvT family.
   
 0.796
SFL05336.1
Predicted kinase.
   
   0.777
SFL54269.1
Protoporphyrin IX magnesium-chelatase.
  
 0.719
gcvP
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
  0.700
SFK61126.1
Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase.
  
 
  0.681
SFK53701.1
Thioredoxin reductase (NADPH).
  
 
 0.556
SFL76296.1
Methyltransferase domain-containing protein.
  
 
  0.520
SFL25095.1
Sulfate adenylyltransferase.
    
 0.500
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
 0.500
Your Current Organism:
Geodermatophilus ruber
NCBI taxonomy Id: 504800
Other names: CCM 7619, DSM 45317, G. ruber, Geodermatophilus ruber Zhang et al. 2011 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CPCC 201356, JCM 17967, strain CPCC 201356
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