STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL38206.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
SFL60226.1
Trehalose 6-phosphate synthase.
  
 
 0.831
SFL37708.1
Hypothetical protein.
   
    0.631
SFL80814.1
Wiskott-Aldrich syndrome protein.
   
    0.611
SFL25894.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.543
SFL38778.1
Hypothetical protein.
    
 0.516
SFL38238.1
Hypothetical protein.
       0.505
SFL38266.1
Protein of unknown function.
       0.505
SFL08275.1
Maltooligosyl trehalose hydrolase.
   
 0.487
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.487
SFL55710.1
AAA domain-containing protein.
   
    0.487
Your Current Organism:
Geodermatophilus ruber
NCBI taxonomy Id: 504800
Other names: CCM 7619, DSM 45317, G. ruber, Geodermatophilus ruber Zhang et al. 2011 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CPCC 201356, JCM 17967, strain CPCC 201356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.