Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFK72840.1 | SFL50343.1 | SAMN04488085_103222 | SAMN04488085_11286 | TIGR03083 family protein. | Helix-turn-helix domain-containing protein. | 0.664 |
SFL50343.1 | SFK72840.1 | SAMN04488085_11286 | SAMN04488085_103222 | Helix-turn-helix domain-containing protein. | TIGR03083 family protein. | 0.664 |
SFL50343.1 | SFL50362.1 | SAMN04488085_11286 | SAMN04488085_11287 | Helix-turn-helix domain-containing protein. | PH domain-containing protein. | 0.668 |
SFL50343.1 | SFL64139.1 | SAMN04488085_11286 | SAMN04488085_114144 | Helix-turn-helix domain-containing protein. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.732 |
SFL50343.1 | ilvD | SAMN04488085_11286 | SAMN04488085_11285 | Helix-turn-helix domain-containing protein. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.606 |
SFL50343.1 | nadE | SAMN04488085_11286 | SAMN04488085_102307 | Helix-turn-helix domain-containing protein. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.641 |
SFL50362.1 | SFL50343.1 | SAMN04488085_11287 | SAMN04488085_11286 | PH domain-containing protein. | Helix-turn-helix domain-containing protein. | 0.668 |
SFL50362.1 | ilvD | SAMN04488085_11287 | SAMN04488085_11285 | PH domain-containing protein. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.494 |
SFL64139.1 | SFL50343.1 | SAMN04488085_114144 | SAMN04488085_11286 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | Helix-turn-helix domain-containing protein. | 0.732 |
SFL64139.1 | nadE | SAMN04488085_114144 | SAMN04488085_102307 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.946 |
ilvD | SFL50343.1 | SAMN04488085_11285 | SAMN04488085_11286 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | Helix-turn-helix domain-containing protein. | 0.606 |
ilvD | SFL50362.1 | SAMN04488085_11285 | SAMN04488085_11287 | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | PH domain-containing protein. | 0.494 |
nadE | SFL50343.1 | SAMN04488085_102307 | SAMN04488085_11286 | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Helix-turn-helix domain-containing protein. | 0.641 |
nadE | SFL64139.1 | SAMN04488085_102307 | SAMN04488085_114144 | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.946 |