STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFK53886.1Threonine dehydrogenase. (391 aa)    
Predicted Functional Partners:
SFK53850.1
Glutathione-independent formaldehyde dehydrogenase.
 
  
 
0.882
SFK53866.1
Hypothetical protein.
 
    0.850
SFK40272.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.783
SFK41839.1
Alcohol dehydrogenase.
  
 
0.736
SFL14320.1
Alcohol dehydrogenase, class IV.
  
 
 0.682
SFK33386.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.681
SFL56813.1
Alcohol dehydrogenase (cytochrome c).
   
 
  0.673
SFL76149.1
Haloalkane dehalogenase.
   
 
  0.673
SFL21981.1
Threonine dehydratase.
   
 
 0.667
SFL44768.1
Glutathione-independent formaldehyde dehydrogenase.
  
  
 
0.607
Your Current Organism:
Geodermatophilus ruber
NCBI taxonomy Id: 504800
Other names: CCM 7619, DSM 45317, G. ruber, Geodermatophilus ruber Zhang et al. 2011 emend. Montero-Calasanz et al. 2017, Geodermatophilus sp. CPCC 201356, JCM 17967, strain CPCC 201356
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.