STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF98202.1Transposase, Mutator family; Required for the transposition of the insertion element. (95 aa)    
Predicted Functional Partners:
SDG54957.1
methylmalonyl-CoA mutase, N-terminal domain.
  
 0.997
SDH63671.1
methylmalonyl-CoA mutase.
  
 0.997
SDH49976.1
methylmalonyl-CoA mutase, C-terminal domain.
  
 0.944
SDG54770.1
methylmalonyl-CoA/ethylmalonyl-CoA epimerase.
    
 0.789
SDG45625.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.770
SDI23764.1
Transposase, Mutator family; Required for the transposition of the insertion element.
 
     0.754
SDI25868.1
Transposase, Mutator family.
 
     0.754
SDI52069.1
Transposase, Mutator family.
 
     0.754
sucC
succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.740
SDH49673.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.730
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.