STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG05267.1Lanthionine synthetase C-like protein. (358 aa)    
Predicted Functional Partners:
SDG05297.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
   
 0.948
SDG05351.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
     0.890
SDG41283.1
Lantibiotic dehydratase, C terminus.
   
 0.782
SDG75258.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
   
 0.782
SDI20186.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
   
 0.782
SDG05240.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
       0.757
SDG99817.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
   
 0.755
SDI20239.1
protein-L-isoaspartate(D-aspartate) O-methyltransferase.
     0.727
SDG95131.1
Regulatory protein, luxR family.
 
     0.712
SDG75285.1
Lanthionine synthetase C-like protein.
  
  
 
0.700
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.