Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG06132.1 | SDG06153.1 | SAMN05421505_101267 | SAMN05421505_101268 | Hypothetical protein. | Uncharacterized membrane protein. | 0.504 |
SDG06132.1 | SDG06178.1 | SAMN05421505_101267 | SAMN05421505_101269 | Hypothetical protein. | Protein-disulfide isomerase. | 0.504 |
SDG06153.1 | SDG06132.1 | SAMN05421505_101268 | SAMN05421505_101267 | Uncharacterized membrane protein. | Hypothetical protein. | 0.504 |
SDG06153.1 | SDG06178.1 | SAMN05421505_101268 | SAMN05421505_101269 | Uncharacterized membrane protein. | Protein-disulfide isomerase. | 0.963 |
SDG06153.1 | SDG06203.1 | SAMN05421505_101268 | SAMN05421505_101270 | Uncharacterized membrane protein. | Exonuclease SbcC. | 0.419 |
SDG06153.1 | SDG44016.1 | SAMN05421505_101268 | SAMN05421505_104157 | Uncharacterized membrane protein. | Thiol-disulfide isomerase or thioredoxin. | 0.456 |
SDG06153.1 | sbcD | SAMN05421505_101268 | SAMN05421505_101271 | Uncharacterized membrane protein. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.419 |
SDG06178.1 | SDG06132.1 | SAMN05421505_101269 | SAMN05421505_101267 | Protein-disulfide isomerase. | Hypothetical protein. | 0.504 |
SDG06178.1 | SDG06153.1 | SAMN05421505_101269 | SAMN05421505_101268 | Protein-disulfide isomerase. | Uncharacterized membrane protein. | 0.963 |
SDG06178.1 | SDG06203.1 | SAMN05421505_101269 | SAMN05421505_101270 | Protein-disulfide isomerase. | Exonuclease SbcC. | 0.425 |
SDG06178.1 | SDG44016.1 | SAMN05421505_101269 | SAMN05421505_104157 | Protein-disulfide isomerase. | Thiol-disulfide isomerase or thioredoxin. | 0.528 |
SDG06178.1 | SDH47575.1 | SAMN05421505_101269 | SAMN05421505_11699 | Protein-disulfide isomerase. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.492 |
SDG06178.1 | nhaA | SAMN05421505_101269 | SAMN05421505_10487 | Protein-disulfide isomerase. | Na+:H+ antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. | 0.491 |
SDG06178.1 | sbcD | SAMN05421505_101269 | SAMN05421505_101271 | Protein-disulfide isomerase. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.419 |
SDG06203.1 | SDG06153.1 | SAMN05421505_101270 | SAMN05421505_101268 | Exonuclease SbcC. | Uncharacterized membrane protein. | 0.419 |
SDG06203.1 | SDG06178.1 | SAMN05421505_101270 | SAMN05421505_101269 | Exonuclease SbcC. | Protein-disulfide isomerase. | 0.425 |
SDG06203.1 | sbcD | SAMN05421505_101270 | SAMN05421505_101271 | Exonuclease SbcC. | Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.998 |
SDG44016.1 | SDG06153.1 | SAMN05421505_104157 | SAMN05421505_101268 | Thiol-disulfide isomerase or thioredoxin. | Uncharacterized membrane protein. | 0.456 |
SDG44016.1 | SDG06178.1 | SAMN05421505_104157 | SAMN05421505_101269 | Thiol-disulfide isomerase or thioredoxin. | Protein-disulfide isomerase. | 0.528 |
SDH47575.1 | SDG06178.1 | SAMN05421505_11699 | SAMN05421505_101269 | Predicted dithiol-disulfide isomerase, DsbA family. | Protein-disulfide isomerase. | 0.492 |
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