STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG07206.1Ig-like domain-containing protein. (349 aa)    
Predicted Functional Partners:
SDH90514.1
ABC-2 type transport system permease protein.
  
     0.695
SDG19531.1
Protein of unknown function.
  
     0.567
SDG07182.1
SseB protein N-terminal domain-containing protein.
       0.472
SDI59032.1
Deoxyribonuclease NucA/NucB.
  
     0.459
SDI60659.1
Hypothetical protein.
  
     0.447
SDI30471.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.446
SDI16390.1
WHG domain-containing protein.
  
     0.430
SDH50907.1
Peptidase propeptide and YPEB domain-containing protein.
  
     0.418
SDI02659.1
RHS repeat-associated core domain-containing protein.
  
     0.414
SDH76014.1
RHS repeat-associated core domain-containing protein.
  
     0.403
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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