STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG08197.1RNA polymerase sigma-70 factor, ECF subfamily. (285 aa)    
Predicted Functional Partners:
SDG08228.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.943
SDI03167.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
      
 0.687
SDH58232.1
Alkylhydroperoxidase AhpD family core domain-containing protein.
 
    0.679
SDG08159.1
DNA-binding transcriptional regulator, FadR family.
  
 
 0.598
SDI03836.1
RNA polymerase sigma-70 factor, ECF subfamily.
      
 0.535
SDH51179.1
RNA polymerase sigma-70 factor, ECF subfamily.
      
 0.534
SDH73049.1
RNA polymerase sigma-70 factor, ECF subfamily.
      
 0.525
SDI03797.1
Mycothiol system anti-sigma-R factor.
   
 
 0.444
SDG40921.1
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain.
  
    0.428
SDG43326.1
DNA-binding transcriptional regulator, MarR family.
  
    0.423
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.