STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG21856.1Hypothetical protein. (86 aa)    
Predicted Functional Partners:
SDG80200.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.929
SDG40408.1
Hypothetical protein.
   
 0.913
SDG21820.1
Kynurenine formamidase.
 
 
  0.826
SDI47357.1
Acyl transferase domain-containing protein.
  
 0.802
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.781
SDH03106.1
Thioredoxin reductase (NADPH).
   
 0.759
SDH70019.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
    
  0.737
SDH27459.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.735
SDG78715.1
Hypothetical protein.
    
 0.734
SDG75593.1
Acyl transferase domain-containing protein.
  
 
 0.726
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.