STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG33084.1Hypothetical protein. (514 aa)    
Predicted Functional Partners:
SDH88119.1
Sulfotransferase family protein.
  
     0.775
SDG90027.1
AAA-like domain-containing protein.
  
     0.774
SDG90061.1
TrbL/VirB6 plasmid conjugal transfer protein.
  
     0.773
SDG31307.1
Nuclease-related domain-containing protein.
  
     0.771
SDG40278.1
Uncharacterized conserved protein, LabA/DUF88 family.
 
     0.770
SDH52136.1
Hypothetical protein.
  
     0.770
SDG33159.1
PAS domain S-box-containing protein.
 
     0.769
SDG43723.1
Quinol monooxygenase YgiN.
  
     0.766
SDG39863.1
GTP cyclohydrolase III.
  
     0.756
SDG58455.1
Suppressor of fused protein (SUFU).
  
     0.751
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.