Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDG05384.1 | SDG20523.1 | SAMN05421505_101237 | SAMN05421505_102247 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.521 |
SDG05384.1 | SDG33812.1 | SAMN05421505_101237 | SAMN05421505_103247 | Helix-turn-helix domain-containing protein. | Endonuclease, Uma2 family (restriction endonuclease fold). | 0.418 |
SDG05384.1 | SDH01596.1 | SAMN05421505_101237 | SAMN05421505_110117 | Helix-turn-helix domain-containing protein. | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.430 |
SDG05384.1 | SDH89002.1 | SAMN05421505_101237 | SAMN05421505_12573 | Helix-turn-helix domain-containing protein. | ABC-2 type transport system permease protein. | 0.427 |
SDG20523.1 | SDG05384.1 | SAMN05421505_102247 | SAMN05421505_101237 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.521 |
SDG20523.1 | SDG33812.1 | SAMN05421505_102247 | SAMN05421505_103247 | Hypothetical protein. | Endonuclease, Uma2 family (restriction endonuclease fold). | 0.451 |
SDG20523.1 | SDH61815.1 | SAMN05421505_102247 | SAMN05421505_11919 | Hypothetical protein. | Helix-turn-helix domain-containing protein. | 0.438 |
SDG33788.1 | SDG33812.1 | SAMN05421505_103246 | SAMN05421505_103247 | Hypothetical protein. | Endonuclease, Uma2 family (restriction endonuclease fold). | 0.420 |
SDG33812.1 | SDG05384.1 | SAMN05421505_103247 | SAMN05421505_101237 | Endonuclease, Uma2 family (restriction endonuclease fold). | Helix-turn-helix domain-containing protein. | 0.418 |
SDG33812.1 | SDG20523.1 | SAMN05421505_103247 | SAMN05421505_102247 | Endonuclease, Uma2 family (restriction endonuclease fold). | Hypothetical protein. | 0.451 |
SDG33812.1 | SDG33788.1 | SAMN05421505_103247 | SAMN05421505_103246 | Endonuclease, Uma2 family (restriction endonuclease fold). | Hypothetical protein. | 0.420 |
SDG33812.1 | SDG88294.1 | SAMN05421505_103247 | SAMN05421505_1091 | Endonuclease, Uma2 family (restriction endonuclease fold). | Putative transposase. | 0.542 |
SDG33812.1 | SDH01596.1 | SAMN05421505_103247 | SAMN05421505_110117 | Endonuclease, Uma2 family (restriction endonuclease fold). | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | 0.530 |
SDG33812.1 | SDH25212.1 | SAMN05421505_103247 | SAMN05421505_11323 | Endonuclease, Uma2 family (restriction endonuclease fold). | Putative restriction endonuclease. | 0.671 |
SDG33812.1 | SDH30850.1 | SAMN05421505_103247 | SAMN05421505_1141 | Endonuclease, Uma2 family (restriction endonuclease fold). | Putative transposase. | 0.572 |
SDG33812.1 | SDH35153.1 | SAMN05421505_103247 | SAMN05421505_114116 | Endonuclease, Uma2 family (restriction endonuclease fold). | DNA-binding transcriptional regulator, AcrR family. | 0.489 |
SDG33812.1 | SDH61815.1 | SAMN05421505_103247 | SAMN05421505_11919 | Endonuclease, Uma2 family (restriction endonuclease fold). | Helix-turn-helix domain-containing protein. | 0.510 |
SDG33812.1 | SDH89002.1 | SAMN05421505_103247 | SAMN05421505_12573 | Endonuclease, Uma2 family (restriction endonuclease fold). | ABC-2 type transport system permease protein. | 0.414 |
SDG88294.1 | SDG33812.1 | SAMN05421505_1091 | SAMN05421505_103247 | Putative transposase. | Endonuclease, Uma2 family (restriction endonuclease fold). | 0.542 |
SDH01596.1 | SDG05384.1 | SAMN05421505_110117 | SAMN05421505_101237 | Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase. | Helix-turn-helix domain-containing protein. | 0.430 |
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