STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDG33969.1Uncharacterized membrane protein YjfL, UPF0719 family. (149 aa)    
Predicted Functional Partners:
SDG33998.1
Glutathionylspermidine synthase.
 
   0.900
SDG34020.1
Hypothetical protein.
 
     0.875
SDG91484.1
Protein of unknown function.
 
     0.727
SDH51140.1
Hypothetical protein.
  
     0.600
SDG33949.1
PucR C-terminal helix-turn-helix domain-containing protein.
       0.574
SDH68039.1
Glutathionylspermidine synthase.
 
   0.568
SDG04229.1
DNA polymerase (family 10).
  
  
 0.554
SDG34047.1
HTH domain-containing protein.
       0.485
SDH52396.1
Protein of unknown function.
  
     0.479
SDH52136.1
Hypothetical protein.
  
     0.471
Your Current Organism:
Sinosporangium album
NCBI taxonomy Id: 504805
Other names: DSM 45181, KCTC 19655, S. album, Sinosporangium album Zang et al. 2011, Streptosporangineae bacterium 6014, strain 6014
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